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Installing STIR with CMake

CMake is a cross-platform tool for building projects.

CMake FAQ How to sue a different compiler

Step 1: Run cmake

Launching CMake

If you have Windows or MacOSX, CMake comes as an application with a nice GUI. After launching it, you first select the source directory (STIR) and then a build directory. It's recommended to build one level up from STIR. Call it anything you like, but e.g. STIR-bin. (On Unix/Linux/MacOSX you will probably be using make to build things. In that case, you want different build directories for every type of build (Debug or Release) you want to make. On Windows when using Visual Studio, you can build different versions from one CMake configuration).

On Unix/linux (or MacOSX from a terminal window), you have to use a slightly more basic user interface. You would launch this as follows.

mkdir STIR-bin
cd STIR-bin
mkdir Release
cd Release
ccmake ../../STIR

Once CMake has started, you have to press the 'Configure' button (or c key). You might get a "help" screen with some information, which you'll need to cloes (After reading the information of courses). For example, if some required libraries are missing, it will tell you. e.g. saying that FindBoost.cmake cannot find boost. You then get back to a screen with the configuration variables, where you can adjust things. For example, if you installed boost somewhere where cmake didn't find it, you can edit its location there. Similarly, for the ECAT LLN library you can specify the location of its include files and the library you want to link with.

If you change one of the variables, you will have to configure again. For example, on my Linux system, the variables end up to something like this.

 AVW_ROOT_DIR                                                                  
 BOOST_ROOT                                                                    
 BUILD_SHARED_LIBS                OFF                                          
 CMAKE_BUILD_TYPE                 Release
 CMAKE_INSTALL_PREFIX             /home/kris/                
 CURSES_CURSES_H_PATH             /usr/include                                 
 CURSES_FORM_LIBRARY              /usr/lib/libform.so                          
 CURSES_HAVE_CURSES_H             /usr/include/curses.h                        
 DISABLE_AVW                      OFF                                          
 DISABLE_LLN_MATRIX               OFF                                          
 DISABLE_RDF                      OFF                         
 DISABLE_STIR_LOCAL               OFF                          
 GRAPHICS                         X                                            
 LLN_INCLUDE_DIRS                 /home/kris/devel/lln/ecat                    
 LLN_LIBRARIES                    /home/kris/devel/lln/ecat/debuggcc_64/libecat.a
 RDF_INCLUDE_DIRS                 RDF_INCLUDE_DIRS-NOTFOUND                    
 RDF_LIBRARIES                    RDF_LIBRARIES-NOTFOUND                       
 STIR_LOCAL                       /home/kris/devel/STIR/local        
 STIR_MPI                         OFF                                           
 STIR_OPENMP                      OFF

The 'DISABLE_*' variables allow you to disable some features, even if you have the necessary libraries.

Once you are happy, you have to press generate. After this, you can quit CMake.

Stage 2: actual compilation

The previous step used CMake to generate files for the build system appropriate for your OS. Now, you need to use the build system to compile STIR. We just list the 2 most common ones:

Unix-type systems: make

CMake will have created a series of directories in STIR-bin with a series of Makefiles. To build STIR, you just type

make

If there are compilation problems, you might want to see the compilation commands:

make VERBOSE=1

You would normally finish with

make install

Windows and other systems with an IDE for compilation

CMake will have created a series of directories in the build directory with the necessary projects files. For example, for Visual studio, there will be a STIR.sln with targets ALL_BUILD, INSTALL, RUN_TESTS (and projects for every for every library and executable). You would open the STIR solution, and build the relevant target. Remeber to set the type of build (Release or Debug) first from your GUI.